Now showing items 1-3 of 3
Distributed memory building blocks for massive biological sequence analysis
(Georgia Institute of Technology, 2018-04-03)
K-mer indices and de Bruijn graphs are important data structures in bioinformatics with multiple applications ranging from foundational tasks such as error correction, alignment, and genome assembly, to knowledge discovery ...
Optimizing computational kernels in quantum chemistry
(Georgia Institute of Technology, 2018-05-01)
Density fitting is a rank reduction technique popularly used in quantum chemistry in order to reduce the computational cost of evaluating, transforming, and processing the 4-center electron repulsion integrals (ERIs). ...
Scalable tensor decompositions in high performance computing environments
(Georgia Institute of Technology, 2018-07-31)
This dissertation presents novel algorithmic techniques and data structures to help build scalable tensor decompositions on a variety of high-performance computing (HPC) platforms, including multicore CPUs, graphics ...